CONVERTING PIXELS TO MICRONS

In the microscopic world, the most common units of measurements are the micrometer (micron), and the nano-meter.  The micron is one millionth of a meter, and the nano-meter is one billionth of a meter. However, in the field of digital images, the pixel is the basic unit of measurement. Therefore, if we want to measure the dimensions of an object of interest, within a digitally captured microscopic image (micro-graph), we need to convert pixels to microns.

Most good image manipulating programs, include a measuring tool that allows us to measure (in pixels) the distance between any two selected points of an image (a micro-graph in our case). The GIMP (Gnu Image Manipulation Program) is one of those programs. Here is an example, of using the GIMP's measuring tool, to measure (in pixels) the diameter of a red blood cell.



The measuring tool indicates that the distance between the 2 selected points is 203 pixels. However, we need the distance in microns. I know that the image was captured by a Nikon camera at a resolution of 2992x2000 pixels and at a microscope magnification of 1000x. So I look at the conversion tables for the Nikon, and it indicates that I need to divide the measured pixels by 27 in order to convert the value from pixels to microns. So I divide 203 by 27 and get 7.52 microns.

The pixels-to-microns conversion tables, are an easy way to convert pixels to microns. I have created 2 conversion tables, one for each of the 2 digital cameras that I use with the microscope. I am including, on this web page, links to the 2 tables. Each table is available in PDF and HTML formats. The tables have conversion factors for each combination of camera resolution and microscope amplification.

Link to Conversion Table (in HTML format) for the AmScope MU300 microscope digital camera.

Link to Conversion Table (in PDF format) for the AmScope MU300 microscope digital camera.

Link to Conversion Table (in HTML) for the Nikon D-3500 digital camera (with a 10x microscope lens).

Link to Conversion Table (in PDF) for the Nikon D-3500 digital camera (with a 10x microscope lens).

If you are using a camera with different image resolutions, then you need to create a conversion table for your camera. The methodology for creating the conversion tables is very simple. Bellow is a link to step-by-step procedure for creating the table.

CREATING A PIXELS TO MICRONS CONVERSION TABLE

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